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Structure paper

TitleStructural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 119, Page e2203576119-e2203576119, Year 2022
Publish dateFeb 18, 2022 (structure data deposition date)
AuthorsJeoung, J.H. / Nicklisch, S. / Dobbek, H.
External linksProc. Natl. Acad. Sci. USA / PubMed:35905315
MethodsX-ray diffraction
Resolution1.82 - 3.25 Å
Structure data

PDB-7yyl:
nucleotide-free DCCP:DCCP-R complex
Method: X-RAY DIFFRACTION / Resolution: 3.25 Å

PDB-7yzm:
MgADPNP-bound DCCP:DCCP-R complex
Method: X-RAY DIFFRACTION / Resolution: 1.82 Å

PDB-7yzq:
MgADP-AlF4-bound DCCP:DCCP-R complex
Method: X-RAY DIFFRACTION / Resolution: 1.96 Å

Chemicals

ChemComp-BJ8:
Double cubane cluster

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-SO4:
SULFATE ION

ChemComp-NH4:
AMMONIUM ION

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-BU3:
(R,R)-2,3-BUTANEDIOL

ChemComp-TAM:
TRIS(HYDROXYETHYL)AMINOMETHANE / pH buffer*YM

ChemComp-MG:
Unknown entry

ChemComp-ANP:
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER / AMP-PNP, energy-carrying molecule analogue*YM

ChemComp-HOH:
WATER

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-GOL:
GLYCEROL

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-ALF:
TETRAFLUOROALUMINATE ION

Source
  • carboxydothermus hydrogenoformans z-2901 (bacteria)
KeywordsOXIDOREDUCTASE / double cubane cluster / ATP / 4Fe4S cluster / electron transfer

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