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Structure paper

TitleDe novo design of discrete, stable 3 10 -helix peptide assemblies.
Journal, issue, pagesNature, Vol. 607, Page 387-392, Year 2022
Publish dateNov 27, 2021 (structure data deposition date)
AuthorsKumar, P. / Paterson, N.G. / Clayden, J. / Woolfson, D.N.
External linksNature / PubMed:35732733
MethodsX-ray diffraction
Resolution1.41 - 2.34 Å
Structure data

PDB-7qdi:
Structure of octameric left-handed 310-helix bundle: D-310HD
Method: X-RAY DIFFRACTION / Resolution: 2.34 Å

PDB-7qdj:
Racemic structure of PK-10 and PK-11
Method: X-RAY DIFFRACTION / Resolution: 1.44 Å

PDB-7qdk:
A trimeric de novo coiled-coil assembly: CC-TypeN-LaLd
Method: X-RAY DIFFRACTION / Resolution: 1.41 Å

PDB-8bfd:
Racemic structure of PK-7 (310HD-U2U5)
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-8bfe:
A dimeric de novo coiled-coil assembly: PK-2 (CC-TypeN-LaUbUcLd)
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-SO4:
SULFATE ION

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-PG0:
2-(2-METHOXYETHOXY)ETHANOL / inhibitor, precipitant*YM

ChemComp-PG6:
1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE

ChemComp-BO3:
BORIC ACID

ChemComp-PG4:
TETRAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

ChemComp-MLI:
MALONATE ION

ChemComp-GOL:
GLYCEROL

ChemComp-NA:
Unknown entry

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

Source
  • synthetic construct (others)
KeywordsDE NOVO PROTEIN / octamer / 310-helix / LL core / alpha-helical / Racemic Structure / Aib

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