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Structure paper

TitleSubstrate-Based Design of Cytosolic Nucleotidase IIIB Inhibitors and Structural Insights into Inhibition Mechanism.
Journal, issue, pagesPharmaceuticals, Vol. 15, Year 2022
Publish dateMar 31, 2022 (structure data deposition date)
AuthorsKubacka, D. / Kozarski, M. / Baranowski, M.R. / Wojcik, R. / Panecka-Hofman, J. / Strzelecka, D. / Basquin, J. / Jemielity, J. / Kowalska, J.
External linksPharmaceuticals / PubMed:35631380
MethodsX-ray diffraction
Resolution1.36 - 1.56 Å
Structure data

PDB-7zee:
Human cytosolic 5' nucleotidase IIIB
Method: X-RAY DIFFRACTION / Resolution: 1.36 Å

PDB-7zeg:
Human cytosolic 5' nucleotidase IIIB in complex with 3,4-diF-Bn7GMP
Method: X-RAY DIFFRACTION / Resolution: 1.56 Å

PDB-7zeh:
Human cytosolic 5' nucleotidase IIIB in complex with 3,4-diF-Bn7Guanine
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

Chemicals

ChemComp-MES:
2-(N-MORPHOLINO)-ETHANESULFONIC ACID / pH buffer*YM

ChemComp-MG:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-IOO:
N7-(3,4-difluorobenzyl) guanosine 5'-monophosphate

ChemComp-IPQ:
N7-(3,4-difluorobenzyl) guanine

ChemComp-RBL:
D-ribulose

ChemComp-PO4:
PHOSPHATE ION

ChemComp-SO4:
SULFATE ION

Source
  • homo sapiens (human)
KeywordsHYDROLASE / cytosolic 5' nucleotidase / N7 methylguanosine monophosphate dephosphorylation / mRNA cap degradation / nucleotide level regulation

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