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Structure paper

TitleImmunogenicity and therapeutic targeting of a public neoantigen derived from mutated PIK3CA.
Journal, issue, pagesNat Med, Vol. 28, Page 946-957, Year 2022
Publish dateDec 14, 2020 (structure data deposition date)
AuthorsChandran, S.S. / Ma, J. / Klatt, M.G. / Dundar, F. / Bandlamudi, C. / Razavi, P. / Wen, H.Y. / Weigelt, B. / Zumbo, P. / Fu, S.N. ...Chandran, S.S. / Ma, J. / Klatt, M.G. / Dundar, F. / Bandlamudi, C. / Razavi, P. / Wen, H.Y. / Weigelt, B. / Zumbo, P. / Fu, S.N. / Banks, L.B. / Yi, F. / Vercher, E. / Etxeberria, I. / Bestman, W.D. / Da Cruz Paula, A. / Aricescu, I.S. / Drilon, A. / Betel, D. / Scheinberg, D.A. / Baker, B.M. / Klebanoff, C.A.
External linksNat Med / PubMed:35484264
MethodsX-ray diffraction
Resolution1.96 - 3.11 Å
Structure data

PDB-7l1b:
Crystal structure of HLA-A*03:01 in complex with a wild-type PIK3CA peptide
Method: X-RAY DIFFRACTION / Resolution: 2.04 Å

PDB-7l1c:
Crystal structure of HLA-A*03:01 in complex with a mutant PIK3CA peptide
Method: X-RAY DIFFRACTION / Resolution: 1.96 Å

PDB-7l1d:
Crystal structure of human 21LT2-2 TCR bound to HLA-A*03:01 in complex with a mutant PIK3CA peptide
Method: X-RAY DIFFRACTION / Resolution: 3.11 Å

PDB-7rrg:
Crystal structure of human 0606T1-2 TCR bound to HLA-A*03:01 in complex with a mutant PIK3CA peptide
Method: X-RAY DIFFRACTION / Resolution: 2.12 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-FMT:
FORMIC ACID

ChemComp-ACT:
ACETATE ION

Source
  • homo sapiens (human)
KeywordsIMMUNE SYSTEM / peptide Major Histocompatibility complex / T cell receptor

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