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TitleCrystallographic snapshots of a B 12 -dependent radical SAM methyltransferase.
Journal, issue, pagesNature, Vol. 602, Page 336-342, Year 2022
Publish dateNov 19, 2021 (structure data deposition date)
AuthorsFyfe, C.D. / Bernardo-Garcia, N. / Fradale, L. / Grimaldi, S. / Guillot, A. / Brewee, C. / Chavas, L.M.G. / Legrand, P. / Benjdia, A. / Berteau, O.
External linksNature / PubMed:35110733
MethodsX-ray diffraction
Resolution1.9 - 2.701 Å
Structure data

PDB-7qbs:
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, S-adenosyl-L-methionine, and peptide bound.
Method: X-RAY DIFFRACTION / Resolution: 2.327 Å

PDB-7qbt:
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-7qbu:
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-methyl-5'-thioadenosine bound.
Method: X-RAY DIFFRACTION / Resolution: 2.298 Å

PDB-7qbv:
B12-dependent radical SAM methyltransferase, Mmp10 with [4Fe-4S] cluster, cobalamin, and S-adenosyl-L-homocysteine bound.
Method: X-RAY DIFFRACTION / Resolution: 2.701 Å

Chemicals

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-FE:
Unknown entry

ChemComp-SAM:
S-ADENOSYLMETHIONINE

ChemComp-COB:
CO-METHYLCOBALAMIN

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-MTA:
5'-DEOXY-5'-METHYLTHIOADENOSINE

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-SAH:
S-ADENOSYL-L-HOMOCYSTEINE

Source
  • methanosarcina acetivorans (archaea)
KeywordsMETAL BINDING PROTEIN / Radical SAM / B12 binding / methyltransferase / sp3 carbon methylation

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