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Structure paper

TitleStructure of Pseudomonas aeruginosa spermidine dehydrogenase: a polyamine oxidase with a novel heme-binding fold.
Journal, issue, pagesFebs J., Vol. 289, Page 1911-1928, Year 2022
Publish dateOct 13, 2020 (structure data deposition date)
AuthorsChe, S. / Liang, Y. / Chen, Y. / Wu, W. / Liu, R. / Zhang, Q. / Bartlam, M.
External linksFebs J. / PubMed:34741591
MethodsX-ray diffraction
Resolution1.85 - 2.4 Å
Structure data

PDB-7d9f:
SpdH Spermidine dehydrogenase SeMet Structure
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-7d9g:
SpdH Spermidine dehydrogenase native structure
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-7d9h:
SpdH Spermidine dehydrogenase N33 truncation structure
Method: X-RAY DIFFRACTION / Resolution: 2.31 Å

PDB-7d9i:
SpdH Spermidine dehydrogenase D282A mutant
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-7d9j:
SpdH Spermidine dehydrogenase Y443A mutant
Method: X-RAY DIFFRACTION / Resolution: 2.19 Å

Chemicals

ChemComp-FAD:
FLAVIN-ADENINE DINUCLEOTIDE / FAD*YM

ChemComp-HEM:
PROTOPORPHYRIN IX CONTAINING FE

ChemComp-GOL:
GLYCEROL

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

Source
  • pseudomonas aeruginosa (strain atcc 15692 / dsm 22644 / cip 104116 / jcm 14847 / lmg 12228 / 1c / prs 101 / pao1) (bacteria)
KeywordsOXIDOREDUCTASE / SpdH / Spermidine dehydrogenase / Heme-containing monoamine oxidase / Pseudomonas aeruginosa PAO1.

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