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Structure paper

TitleNovel Mechanistic Observations and NES-Binding Groove Features Revealed by the CRM1 Inhibitors Plumbagin and Oridonin.
Journal, issue, pagesJ. Nat. Prod., Vol. 84, Page 1478-1488, Year 2021
Publish dateMar 12, 2020 (structure data deposition date)
AuthorsLei, Y. / Li, Y. / Tan, Y. / Qian, Z. / Zhou, Q. / Jia, D. / Sun, Q.
External linksJ. Nat. Prod. / PubMed:33890470
MethodsX-ray diffraction
Resolution2.06 - 2.88 Å
Structure data

PDB-6m60:
Plumbagin in complex with CRM1#-Ran-RanBP1
Method: X-RAY DIFFRACTION / Resolution: 2.17 Å

PDB-6m6x:
Oridonin in complex with CRM1#-Ran-RanBP1
Method: X-RAY DIFFRACTION / Resolution: 2.88 Å

PDB-7dbg:
Yeast CRM1e (apo) in complex with Ran-RanBP1
Method: X-RAY DIFFRACTION / Resolution: 2.06 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-NO3:
NITRATE ION

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

ChemComp-CL:
Unknown entry

ChemComp-DMS:
DIMETHYL SULFOXIDE / DMSO, precipitant*YM

ChemComp-F2X:
(2~{R})-2-methyl-5-oxidanyl-2,3-dihydronaphthalene-1,4-dione

ChemComp-HOH:
WATER

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-ODN:
(1beta,6beta,7beta,8alpha,9beta,10alpha,13alpha,14R,16beta)-1,6,7,14-tetrahydroxy-7,20-epoxykauran-15-one

ChemComp-MPO:
3[N-MORPHOLINO]PROPANE SULFONIC ACID / pH buffer*YM

Source
  • homo sapiens (human)
  • saccharomyces cerevisiae (strain atcc 204508 / s288c) (yeast)
  • saccharomyces cerevisiae (brewer's yeast)
KeywordsTRANSPORT PROTEIN / Active Ran / Complex / inhibitor

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