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Structure paper

TitleMolecular basis for diaryldiamine selectivity and competition with tRNA in a type 2 methionyl-tRNA synthetase from a Gram-negative bacterium.
Journal, issue, pagesJ. Biol. Chem., Vol. 296, Page 100658-100658, Year 2021
Publish dateApr 28, 2020 (structure data deposition date)
AuthorsMercaldi, G.F. / Andrade, M.O. / Zanella, J.L. / Cordeiro, A.T. / Benedetti, C.E.
External linksJ. Biol. Chem. / PubMed:33857480
MethodsX-ray diffraction
Resolution1.65 - 2 Å
Structure data

PDB-6wq6:
Xanthomonas citri Methionyl-tRNA synthetase in complex with methionine
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-6wqi:
Xanthomonas citri Methionyl-tRNA synthetase (apo)
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6wqs:
Xanthomonas citri Methionyl-tRNA synthetase in complex with REP8839
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6wqt:
Xanthomonas citri Methionyl-tRNA synthetase in complex with REP3123
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-MET:
METHIONINE

ChemComp-HOH:
WATER

ChemComp-U7S:
2-{[3-({[4-bromo-5-(1-fluoroethenyl)-3-methylthiophen-2-yl]methyl}amino)propyl]amino}quinolin-4(1H)-one

ChemComp-U81:
5-[(3-{[(4R)-6,8-dibromo-3,4-dihydro-2H-1-benzopyran-4-yl]amino}propyl)amino]thieno[3,2-b]pyridin-7(6H)-one

Source
  • xanthomonas citri (bacteria)
KeywordsLIGASE / Substrate / Complex / tRNA / aminoacylation / Ligand-free / apo / Bederocin / Citrus canker / CRS3123

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