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Structure paper

TitleStructural basis for recognition of distinct deaminated DNA lesions by endonuclease Q.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 118, Year 2021
Publish dateSep 10, 2020 (structure data deposition date)
AuthorsShi, K. / Moeller, N.H. / Banerjee, S. / McCann, J.L. / Carpenter, M.A. / Yin, L. / Moorthy, R. / Orellana, K. / Harki, D.A. / Harris, R.S. / Aihara, H.
External linksProc. Natl. Acad. Sci. USA / PubMed:33658373
MethodsX-ray diffraction
Resolution2.34 - 3.11 Å
Structure data

PDB-7k30:
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dU at the active site
Method: X-RAY DIFFRACTION / Resolution: 2.34 Å

PDB-7k31:
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with dI at the active site
Method: X-RAY DIFFRACTION / Resolution: 2.88 Å

PDB-7k32:
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with an abasic lesion at the active site
Method: X-RAY DIFFRACTION / Resolution: 3.11 Å

PDB-7k33:
Crystal structure of Endonuclease Q complex with 27-mer duplex substrate with an abasic lesion at the active site
Method: X-RAY DIFFRACTION / Resolution: 3.11 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-CL:
Unknown entry

Source
  • pyrococcus furiosus (archaea)
  • synthetic construct (others)
KeywordsHYDROLASE/DNA / HYDROLASE / deamination / HYDROLASE-DNA complex

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