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Structure paper

TitleStructural basis for the substrate specificity and catalytic features of pseudouridine kinase from Arabidopsis thaliana.
Journal, issue, pagesNucleic Acids Res., Vol. 49, Page 491-503, Year 2021
Publish dateMay 6, 2020 (structure data deposition date)
AuthorsKim, S.H. / Witte, C.P. / Rhee, S.
External linksNucleic Acids Res. / PubMed:33290549
MethodsX-ray diffraction
Resolution2.0834261145 - 2.38942849211 Å
Structure data

PDB-7c1x:
Unliganded structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Method: X-RAY DIFFRACTION / Resolution: 2.38942849211 Å

PDB-7c1y:
Pseudouridine and ADP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Method: X-RAY DIFFRACTION / Resolution: 2.0834261145 Å

PDB-7c1z:
ATP bound structure of Pseudouridine kinase (PUKI) from Arabidopsis thaliana
Method: X-RAY DIFFRACTION / Resolution: 2.09617035687 Å

Chemicals

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-FJF:
5-[(2~{S},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-1~{H}-pyrimidine-2,4-dione

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

Source
  • arabidopsis thaliana (thale cress)
KeywordsRNA / Pseudouridine / kinase / psedouridine kinase / PUKI

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