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Structure paper

TitleThe trajectory of intrahelical lesion recognition and extrusion by the human 8-oxoguanine DNA glycosylase.
Journal, issue, pagesNat Commun, Vol. 11, Page 4437-4437, Year 2020
Publish dateMar 2, 2020 (structure data deposition date)
AuthorsShigdel, U.K. / Ovchinnikov, V. / Lee, S.J. / Shih, J.A. / Karplus, M. / Nam, K. / Verdine, G.L.
External linksNat Commun / PubMed:32895378
MethodsX-ray diffraction
Resolution2.35 - 2.38 Å
Structure data

PDB-6w0m:
Human 8-oxoguanine glycosylase crosslinked with oxoG lesion containing DNA
Method: X-RAY DIFFRACTION / Resolution: 2.37 Å

PDB-6w0r:
Human 8-oxoguanine glycosylase interrogating fully intrahelical undamaged DNA
Method: X-RAY DIFFRACTION / Resolution: 2.35 Å

PDB-6w13:
Human 8-oxoguanine glycosylase interrogating fully intrahelical oxoG lesion DNA
Method: X-RAY DIFFRACTION / Resolution: 2.38 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-S5Y:
2-(2-ethoxyethoxy)ethanethiol

ChemComp-HOH:
WATER

ChemComp-NA:
Unknown entry

ChemComp-NO3:
NITRATE ION

ChemComp-ACT:
ACETATE ION

Source
  • homo sapiens (human)
KeywordsLyase/DNA / hOGG1 / 8-oxoG / Encounter complex / Interrogation complex / DNA BINDING PROTEIN / Lyase-DNA complex

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