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TitleStructural and kinetic properties of serine hydroxymethyltransferase from the halophytic cyanobacterium Aphanothece halophytica provide a rationale for salt tolerance.
Journal, issue, pagesInt. J. Biol. Macromol., Vol. 159, Page 517-529, Year 2020
Publish dateApr 8, 2020 (structure data deposition date)
AuthorsNogues, I. / Tramonti, A. / Angelaccio, S. / Ruszkowski, M. / Sekula, B. / Contestabile, R.
External linksInt. J. Biol. Macromol. / PubMed:32417544
MethodsX-ray diffraction
Resolution1.25 - 1.77 Å
Structure data

PDB-6ymd:
Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the covalent complex with malonate
Method: X-RAY DIFFRACTION / Resolution: 1.25 Å

PDB-6yme:
Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the PLP-internal aldimine state
Method: X-RAY DIFFRACTION / Resolution: 1.77 Å

PDB-6ymf:
Crystal structure of serine hydroxymethyltransferase from Aphanothece halophytica in the PLP-Serine external aldimine state
Method: X-RAY DIFFRACTION / Resolution: 1.63 Å

Chemicals

ChemComp-PMP:
4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-MLI:
MALONATE ION

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-PLS:
[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINE

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

Source
  • aphanothece halophytica (bacteria)
KeywordsTRANSFERASE / SERINE BIOSYNTHESIS / GLYCINE / PLP / ONE-CARBON METABOLISM / TETRAHYDROFOLATE

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