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TitleMolecular basis for catabolism of the abundant metabolitetrans-4-hydroxy-L-proline by a microbial glycyl radical enzyme.
Journal, issue, pagesElife, Vol. 9, Year 2020
Publish dateFeb 21, 2020 (structure data deposition date)
AuthorsBackman, L.R. / Huang, Y.Y. / Andorfer, M.C. / Gold, B. / Raines, R.T. / Balskus, E.P. / Drennan, C.L.
External linksElife / PubMed:32180548
MethodsX-ray diffraction
Resolution2.05 - 2.464 Å
Structure data

PDB-6vxc:
Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-6vxe:
Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile with substrate trans-4-hydroxy-L-proline bound
Method: X-RAY DIFFRACTION / Resolution: 2.464 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-HYP:
4-HYDROXYPROLINE

Source
  • clostridioides difficile 70-100-2010 (bacteria)
KeywordsLYASE / glycyl radical enzyme / hydroxyproline dehydratase

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