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Structure paper

TitleHPF1 completes the PARP active site for DNA damage-induced ADP-ribosylation.
Journal, issue, pagesNature, Vol. 579, Page 598-602, Year 2020
Publish dateJan 9, 2020 (structure data deposition date)
AuthorsSuskiewicz, M.J. / Zobel, F. / Ogden, T.E.H. / Fontana, P. / Ariza, A. / Yang, J.C. / Zhu, K. / Bracken, L. / Hawthorne, W.J. / Ahel, D. ...Suskiewicz, M.J. / Zobel, F. / Ogden, T.E.H. / Fontana, P. / Ariza, A. / Yang, J.C. / Zhu, K. / Bracken, L. / Hawthorne, W.J. / Ahel, D. / Neuhaus, D. / Ahel, I.
External linksNature / PubMed:32028527
MethodsX-ray diffraction
Resolution2.09 - 2.96 Å
Structure data

PDB-6tvh:
Selenomethionine-substituted HPF1 from Nematostella vectensis
Method: X-RAY DIFFRACTION / Resolution: 2.651 Å

PDB-6tx1:
HPF1 from Nematostella vectensis
Method: X-RAY DIFFRACTION / Resolution: 2.091 Å

PDB-6tx2:
Human HPF1
Method: X-RAY DIFFRACTION / Resolution: 2.09 Å

PDB-6tx3:
HPF1 bound to catalytic fragment of PARP2
Method: X-RAY DIFFRACTION / Resolution: 2.96 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-NA:
Unknown entry

ChemComp-UHB:
2-[4-[(2S,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]carbonylpiperazin-1-yl]-N-(1-oxidanylidene-2,3-dihydroisoindol-4-yl)ethanamide

Source
  • nematostella vectensis (starlet sea anemone)
  • homo sapiens (human)
KeywordsPROTEIN BINDING / HPF1 / PARP1 / PARP2 / ADP-ribosylation / serine ADP-ribosylation / adaptor / C4orf27 / TRANSFERASE / ARTD2

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