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Structure paper

TitleIsoform-Specific Destabilization of the Active Site Reveals a Molecular Mechanism of Intrinsic Activation of KRas G13D.
Journal, issue, pagesCell Rep, Vol. 28, Page 1538-1550.e7, Year 2019
Publish dateJul 4, 2018 (structure data deposition date)
AuthorsJohnson, C.W. / Lin, Y.J. / Reid, D. / Parker, J. / Pavlopoulos, S. / Dischinger, P. / Graveel, C. / Aguirre, A.J. / Steensma, M. / Haigis, K.M. / Mattos, C.
External linksCell Rep / PubMed:31390567
MethodsX-ray diffraction
Resolution1.9 - 3.401 Å
Structure data

PDB-6dzh:
HRAS G13D bound to GDP (H13GDP)
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-6e6c:
HRAS G13D bound to GppNHp (H13GNP)
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-6e6f:
KRAS G13D bound to GppNHp (K13GNP)
Method: X-RAY DIFFRACTION / Resolution: 3.401 Å

PDB-6e6g:
KRAS G13D bound to GDP (K13GDP)
Method: X-RAY DIFFRACTION / Resolution: 1.93 Å

PDB-6e6h:
NRAS G13D bound to GppNHp (N13GNP)
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

PDB-6e6p:
HRAS G13D bound to GppNHp (Ha,b,c13GNP)
Method: X-RAY DIFFRACTION / Resolution: 1.93 Å

Chemicals

ChemComp-GDP:
GUANOSINE-5'-DIPHOSPHATE / GDP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-CA:
Unknown entry

ChemComp-DTT:
2,3-DIHYDROXY-1,4-DITHIOBUTANE

ChemComp-HOH:
WATER

ChemComp-GNP:
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER / GppNHp, GMPPNP, energy-carrying molecule analogue*YM

ChemComp-NA:
Unknown entry

Source
  • homo sapiens (human)
KeywordsSIGNALING PROTEIN / Oncogene / RAS / p21

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