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TitleStructure-Function Analysis Indicates that an Active-Site Water Molecule Participates in Dimethylsulfoniopropionate Cleavage by DddK.
Journal, issue, pagesAppl. Environ. Microbiol., Vol. 85, Year 2019
Publish dateJun 21, 2018 (structure data deposition date)
AuthorsPeng, M. / Chen, X.L. / Zhang, D. / Wang, X.J. / Wang, N. / Wang, P. / Todd, J.D. / Zhang, Y.Z. / Li, C.Y.
External linksAppl. Environ. Microbiol. / PubMed:30770407
MethodsX-ray diffraction
Resolution1.6 - 2.3 Å
Structure data

PDB-6a53:
Crystal structure of DddK
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6a54:
Crystal structure of DddK mutant Y64A
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-6a55:
Crystal structure of DddK mutant Y122A
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

Chemicals

ChemComp-MN:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-DQY:
3-(dimethyl-lambda~4~-sulfanyl)propanoic acid

Source
  • pelagibacter ubique (strain htcc1062) (bacteria)
KeywordsLYASE / DMSP lyase

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