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Structure paper

TitleHigh-resolution crystal structures of ribosome-bound chloramphenicol and erythromycin provide the ultimate basis for their competition.
Journal, issue, pagesRNA, Vol. 25, Page 600-606, Year 2019
Publish dateDec 13, 2018 (structure data deposition date)
AuthorsSvetlov, M.S. / Plessa, E. / Chen, C.W. / Bougas, A. / Krokidis, M.G. / Dinos, G.P. / Polikanov, Y.S.
External linksRNA / PubMed:30733327
MethodsX-ray diffraction
Resolution2.6 - 2.85 Å
Structure data

PDB-6nd5:
Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-6nd6:
Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-CLM:
CHLORAMPHENICOL / antibiotic*YM

ChemComp-K:
Unknown entry

ChemComp-ZN:
Unknown entry

ChemComp-SF4:
IRON/SULFUR CLUSTER

ChemComp-HOH:
WATER

ChemComp-ERY:
ERYTHROMYCIN A / antibiotic*YM

Source
  • escherichia coli (E. coli)
  • thermus thermophilus (strain hb8 / atcc 27634 / dsm 579) (bacteria)
  • enterobacteria phage t4 (virus)
KeywordsRIBOSOME/ANTIBIOTIC / Chloramphenicol / erythromycin / competition / antibiotic / 70S ribosome / inhibition of translation / peptidyl transferase center / nascent peptide exit tunnel / RIBOSOME / RIBOSOME-ANTIBIOTIC complex

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