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TitleStructure-Based Design of Potent Tumor-Associated Antigens: Modulation of Peptide Presentation by Single-Atom O/S or O/Se Substitutions at the Glycosidic Linkage.
Journal, issue, pagesJ. Am. Chem. Soc., Vol. 141, Page 4063-4072, Year 2019
Publish dateFeb 20, 2017 (structure data deposition date)
AuthorsCompanon, I. / Guerreiro, A. / Mangini, V. / Castro-Lopez, J. / Escudero-Casao, M. / Avenoza, A. / Busto, J.H. / Castillon, S. / Jimenez-Barbero, J. / Asensio, J.L. ...Companon, I. / Guerreiro, A. / Mangini, V. / Castro-Lopez, J. / Escudero-Casao, M. / Avenoza, A. / Busto, J.H. / Castillon, S. / Jimenez-Barbero, J. / Asensio, J.L. / Jimenez-Oses, G. / Boutureira, O. / Peregrina, J.M. / Hurtado-Guerrero, R. / Fiammengo, R. / Bernardes, G.J.L. / Corzana, F.
External linksJ. Am. Chem. Soc. / PubMed:30726084
MethodsX-ray diffraction
Resolution1.4 - 1.7 Å
Structure data

PDB-5n7b:
Understanding the singular conformational landscape of the Tn antigens: Sulfur-for- oxygen substitution in the glycosidic linkage provides new insights into molecular recognition by an antibody
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-6frj:
Crystal structure of scFv-SM3 in complex with APD-SeThrGalNAc-RP
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

Chemicals

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-A2G:
2-acetamido-2-deoxy-alpha-D-galactopyranose

ChemComp-HOH:
WATER

Source
  • mus musculus (house mouse)
  • synthetic construct (others)
KeywordsIMMUNE SYSTEM / ANTIBODIES / ANTIGEN Tn / Glycopeptides / molecular recognition / conformation analysis

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