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Structure paper

TitleActive-site deformation in the structure of HIV-1 RT with HBV-associated septuple amino acid substitutions rationalizes the differential susceptibility of HIV-1 and HBV against 4'-modified nucleoside RT inhibitors.
Journal, issue, pagesBiochem. Biophys. Res. Commun., Vol. 509, Page 943-948, Year 2019
Publish dateOct 15, 2018 (structure data deposition date)
AuthorsYasutake, Y. / Hattori, S.I. / Tamura, N. / Matsuda, K. / Kohgo, S. / Maeda, K. / Mitsuya, H.
External linksBiochem. Biophys. Res. Commun. / PubMed:30648556
MethodsX-ray diffraction
Resolution2.435 - 2.598 Å
Structure data

PDB-6ik9:
HIV-1 reverse transcriptase with Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:dGTP ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.435 Å

PDB-6ika:
HIV-1 reverse transcriptase with Q151M/G112S/D113A/Y115F/F116Y/F160L/I159L:DNA:entecavir-triphosphate ternary complex
Method: X-RAY DIFFRACTION / Resolution: 2.598 Å

Chemicals

ChemComp-DGT:
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE

ChemComp-MG:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-ET9:
[[(1R,3S,5S)-3-(2-azanyl-6-oxidanylidene-3H-purin-9-yl)-2-methylidene-5-oxidanyl-cyclopentyl]methoxy-oxidanyl-phosphory

Source
  • human immunodeficiency virus 1
  • synthetic construct (others)
  • human immunodeficiency virus type 1
KeywordsTRANSFERASE/DNA / HIV-1 / HBV / reverse transcriptase / drug resistance / drug sensitivity / entecavir / TRANSFERASE-DNA complex / REPLICATION / ENTECAVIR 5'-TRIPHOSPHATE

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