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TitleA surface endogalactanase in Bacteroides thetaiotaomicron confers keystone status for arabinogalactan degradation.
Journal, issue, pagesNat Microbiol, Vol. 3, Page 1314-1326, Year 2018
Publish dateOct 10, 2017 (structure data deposition date)
AuthorsCartmell, A. / Munoz-Munoz, J. / Briggs, J.A. / Ndeh, D.A. / Lowe, E.C. / Basle, A. / Terrapon, N. / Stott, K. / Heunis, T. / Gray, J. ...Cartmell, A. / Munoz-Munoz, J. / Briggs, J.A. / Ndeh, D.A. / Lowe, E.C. / Basle, A. / Terrapon, N. / Stott, K. / Heunis, T. / Gray, J. / Yu, L. / Dupree, P. / Fernandes, P.Z. / Shah, S. / Williams, S.J. / Labourel, A. / Trost, M. / Henrissat, B. / Gilbert, H.J.
External linksNat Microbiol / PubMed:30349080
MethodsX-ray diffraction
Resolution1.61 - 2.75 Å
Structure data

PDB-6eon:
Galactanase BT0290
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-6euf:
The GH43, Beta 1,3 Galactosidase, BT0265
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-6eug:
The GH43, Beta 1,3 Galactosidase, BT3683 with galactoimidazole
Method: X-RAY DIFFRACTION / Resolution: 1.61 Å

PDB-6euh:
The GH43, Beta 1,3 Galactosidase, BT3683 with galactodeoxynojirimycin
Method: X-RAY DIFFRACTION / Resolution: 2 Å

PDB-6eui:
The GH43, Beta 1,3 Galactosidase, BT3683 with galactose
Method: X-RAY DIFFRACTION / Resolution: 1.76 Å

PDB-6euj:
The GH43, Beta 1,3 Galactosidase, BT0265
Method: X-RAY DIFFRACTION / Resolution: 2.75 Å

Chemicals

ChemComp-GLA:
alpha-D-galactopyranose

ChemComp-CA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-GIM:
GLUCOIMIDAZOLE

ChemComp-DGJ:
(2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol / medication, Galafold*YM

ChemComp-GAL:
beta-D-galactopyranose

Source
  • bacteroides thetaiotaomicron (bacteria)
  • bacteroides thetaiotaomicron (strain atcc 29148 / dsm 2079 / nctc 10582 / e50 / vpi-5482) (bacteria)
KeywordsHYDROLASE / arabinogalactan proteins; X-ray crystallography; glycoside hydrolases; galactosidases; human gut microbiota / Arabiogalactan / GH43 / Beta 1 / 3 galactosidase / Hexasaccharide

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