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Structure paper

TitleStructural determination of archaeal UDP-N-acetylglucosamine 4-epimerase from Methanobrevibacter ruminantium M1 in complex with the bacterial cell wall intermediate UDP-N-acetylmuramic acid.
Journal, issue, pagesProteins, Vol. 86, Page 1306-1312, Year 2018
Publish dateJun 7, 2018 (structure data deposition date)
AuthorsCarbone, V. / Schofield, L.R. / Sang, C. / Sutherland-Smith, A.J. / Ronimus, R.S.
External linksProteins / PubMed:30242905
MethodsX-ray diffraction
Resolution1.66 Å
Structure data

PDB-6dnt:
UDP-N-acetylglucosamine 4-epimerase from Methanobrevibacter ruminantium M1 in complex with UDP-N-acetylmuramic acid
Method: X-RAY DIFFRACTION / Resolution: 1.66 Å

Chemicals

ChemComp-NAD:
NICOTINAMIDE-ADENINE-DINUCLEOTIDE / NAD*YM

ChemComp-EPZ:
(2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid

ChemComp-ZN:
Unknown entry

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

Source
  • methanobrevibacter ruminantium (strain atcc 35063 / dsm 1093 / jcm 13430 / ocm 146 / m1) (archaea)
KeywordsSUGAR BINDING PROTEIN / UDP-N-acetylglucosamine / WbpP / 4-epimerase / UDP-N-acetylmuramic acid

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