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TitleOptimized arylomycins are a new class of Gram-negative antibiotics.
Journal, issue, pagesNature, Vol. 561, Page 189-194, Year 2018
Publish dateOct 5, 2017 (structure data deposition date)
AuthorsSmith, P.A. / Koehler, M.F.T. / Girgis, H.S. / Yan, D. / Chen, Y. / Crawford, J.J. / Durk, M.R. / Higuchi, R.I. / Kang, J. / Murray, J. ...Smith, P.A. / Koehler, M.F.T. / Girgis, H.S. / Yan, D. / Chen, Y. / Crawford, J.J. / Durk, M.R. / Higuchi, R.I. / Kang, J. / Murray, J. / Paraselli, P. / Park, S. / Phung, W. / Quinn, J.G. / Roberts, T.C. / Rouge, L. / Schwarz, J.B. / Skippington, E. / Wai, J. / Xu, M. / Yu, Z. / Zhang, H. / Tan, M.W. / Heise, C.E.
External linksNature / PubMed:30209367
MethodsX-ray diffraction
Resolution2.407 Å
Structure data

PDB-6b88:
E. coli LepB in complex with GNE0775 ((4S,7S,10S)-10-((S)-4-amino-2-(2-(4-(tert-butyl)phenyl)-4-methylpyrimidine-5-carboxamido)-N-methylbutanamido)-16,26-bis(2-aminoethoxy)-N-(2-iminoethyl)-7-methyl-6,9-dioxo-5,8-diaza-1,2(1,3)-dibenzenacyclodecaphane-4-carboxamide)
Method: X-RAY DIFFRACTION / Resolution: 2.407 Å

Chemicals

ChemComp-CZD:
(8S,11S,14S)-14-{[(2S)-4-amino-2-{[2-(4-tert-butylphenyl)-4-methylpyrimidine-5-carbonyl]amino}butanoyl](methyl)amino}-3,18-bis(2-aminoethoxy)-N-[(2Z)-2-iminoethyl]-11-methyl-10,13-dioxo-9,12-diazatricyclo[13.3.1.1~2,6~]icosa-1(19),2(20),3,5,15,17-hexaene-8-carboxamide

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

ChemComp-HOH:
WATER

Source
  • escherichia coli (strain k12) (bacteria)
KeywordsHYDROLASE/HYDROLASE inhibitor / Signal peptidase / SBDD / antibiotic / HYDROLASE / HYDROLASE-HYDROLASE inhibitor complex

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