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Structure paper

TitleStructure and Reaction Mechanism of the LigJ Hydratase: An Enzyme Critical for the Bacterial Degradation of Lignin in the Protocatechuate 4,5-Cleavage Pathway.
Journal, issue, pagesBiochemistry, Vol. 57, Page 5841-5850, Year 2018
Publish dateJun 28, 2018 (structure data deposition date)
AuthorsHogancamp, T.N. / Mabanglo, M.F. / Raushel, F.M.
External linksBiochemistry / PubMed:30207699
MethodsX-ray diffraction
Resolution1.65 - 2.2 Å
Structure data

PDB-6dwv:
Crystal structure of the LigJ Hydratase in the Apo state
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-6dxq:
Crystal structure of the LigJ Hydratase product complex with 4-carboxy-4-hydroxy-2-oxoadipate
Method: X-RAY DIFFRACTION / Resolution: 2.02 Å

PDB-6dxs:
Crystal structure of the LigJ hydratase E284Q mutant substrate complex with (3Z)-2-keto-4-carboxy-3-hexenedioate
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

Chemicals

ChemComp-ZN:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-7QD:
(2S)-2-hydroxy-4-oxobutane-1,2,4-tricarboxylic acid

ChemComp-HJ7:
(2Z)-4-oxobut-2-ene-1,2,4-tricarboxylic acid

Source
  • sphingobium sp. syk-6 (bacteria)
KeywordsLYASE / Hydratase / lignin degradation / lyase/lyase inhibitor / amidohydrolase / lyase-lyase inhibitor complex

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