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Structure paper

TitleStructural basis of effector and operator recognition by the phenolic acid-responsive transcriptional regulator PadR
Journal, issue, pagesNucleic Acids Res., Vol. 45, Page 13080-13093, Year 2017
Publish dateJan 24, 2017 (structure data deposition date)
AuthorsPark, S.C. / Kwak, Y.M. / Song, W.S. / Hong, M. / Yoon, S.I.
External linksNucleic Acids Res. / PubMed:29136175
MethodsX-ray diffraction
Resolution1.68 - 2.65 Å
Structure data

PDB-5x11:
Crystal structure of Bacillus subtilis PadR in complex with operator DNA
Method: X-RAY DIFFRACTION / Resolution: 2.65 Å

PDB-5x12:
Crystal structure of Bacillus subtilis PadR
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-5x13:
Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-5x14:
Crystal structure of Bacillus subtilis PadR in complex with ferulic acid
Method: X-RAY DIFFRACTION / Resolution: 1.68 Å

PDB-5y8t:
Crystal structure of Bacillus subtilis PadR in complex with p-coumaric acid
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-HC4:
4'-HYDROXYCINNAMIC ACID

ChemComp-GOL:
GLYCEROL

ChemComp-FER:
3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID

Source
  • bacillus subtilis subsp. spizizenii strain w23 (bacteria)
  • synthetic construct (others)
  • bacillus subtilis subsp. spizizenii (strain atcc 23059 / nrrl b-14472 / w23) (bacteria)
KeywordsTRANSCRIPTION/DNA / Transcription factor / DNA / TRANSCRIPTION-DNA complex / TRANSCRIPTION

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