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Structure paper

TitleThe pimeloyl-CoA synthetase BioW defines a new fold for adenylate-forming enzymes.
Journal, issue, pagesNat. Chem. Biol., Vol. 13, Page 668-674, Year 2017
Publish dateNov 8, 2016 (structure data deposition date)
AuthorsEstrada, P. / Manandhar, M. / Dong, S.H. / Deveryshetty, J. / Agarwal, V. / Cronan, J.E. / Nair, S.K.
External linksNat. Chem. Biol. / PubMed:28414711
MethodsX-ray diffraction
Resolution2.25 - 2.55 Å
Structure data

PDB-5tv5:
BioW from Aquifex aeoulicus
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-5tv6:
A. aeolicus BioW with pimelate
Method: X-RAY DIFFRACTION / Resolution: 2.456 Å

PDB-5tv8:
A. aeolicus BioW with AMP-CPP and pimelate
Method: X-RAY DIFFRACTION / Resolution: 2.55 Å

PDB-5tva:
A. aeolicus BioW with AMP and CoA
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-PML:
PIMELIC ACID

ChemComp-APC:
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER / AMP-CPP, energy-carrying molecule analogue*YM

ChemComp-MG:
Unknown entry

ChemComp-AMP:
ADENOSINE MONOPHOSPHATE / AMP*YM

ChemComp-COA:
COENZYME A

Source
  • aquifex aeolicus (bacteria)
KeywordsLIGASE / Pimeloyl-CoA Ligase / adenylation

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