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Structure paper

TitleComplex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode
Journal, issue, pagesEMBO J., Vol. 36, Page 291-300, Year 2017
Publish dateMar 24, 2016 (structure data deposition date)
AuthorsShimada, S. / Shinzawa-Itoh, K. / Baba, J. / Aoe, S. / Shimada, A. / Yamashita, E. / Kang, J. / Tateno, M. / Yoshikawa, S. / Tsukihara, T.
External linksEMBO J. / PubMed:27979921
MethodsX-ray diffraction
Resolution2 Å
Structure data

PDB-5iy5:
Electron transfer complex of cytochrome c and cytochrome c oxidase at 2.0 angstrom resolution
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-CU:
COPPER (II) ION

ChemComp-MG:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-HEA:
HEME-A

ChemComp-PER:
PEROXIDE ION

ChemComp-PGV:
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE / phospholipid*YM

ChemComp-TGL:
TRISTEAROYLGLYCEROL

ChemComp-CUA:
DINUCLEAR COPPER ION

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-CHD:
CHOLIC ACID

ChemComp-PEK:
(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE / phospholipid*YM

ChemComp-CDL:
CARDIOLIPIN / phospholipid*YM


ChemComp, No image

ChemComp-UNL:
Unknown ligand

ChemComp-PSC:
(7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE / phospholipid*YM

ChemComp-ZN:
Unknown entry

ChemComp-DMU:
DECYL-BETA-D-MALTOPYRANOSIDE / detergent*YM

ChemComp-HEC:
HEME C

ChemComp-HOH:
WATER

Source
  • bos taurus (domestic cattle)
  • equus caballus (horse)
KeywordsOXIDOREDUCTASE

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