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Structure paper

TitleThe Molecular Basis for Ubiquitin and Ubiquitin-like Specificities in Bacterial Effector Proteases.
Journal, issue, pagesMol. Cell, Vol. 63, Page 261-276, Year 2016
Publish dateDec 30, 2015 (structure data deposition date)
AuthorsPruneda, J.N. / Durkin, C.H. / Geurink, P.P. / Ovaa, H. / Santhanam, B. / Holden, D.W. / Komander, D.
External linksMol. Cell / PubMed:27425412
MethodsX-ray diffraction
Resolution2.1 - 2.9 Å
Structure data

PDB-5haf:
Structure of Salmonella enterica effector protein SseL
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-5hag:
Structure of Chlamydia trachomatis effector protein ChlaDUB1
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-5ham:
Structure of Rickettsia bellii effector protein RickCE
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-5jp1:
Structure of Xanthomonas campestris effector protein XopD bound to tomato SUMO
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-5jp3:
Structure of Xanthomonas campestris effector protein XopD bound to ubiquitin
Method: X-RAY DIFFRACTION / Resolution: 2.9 Å

Chemicals

ChemComp-K:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-MLI:
MALONATE ION

ChemComp-D1D:
(4S,5S)-1,2-DITHIANE-4,5-DIOL

Source
  • salmonella enterica subsp. enterica serovar typhimurium (bacteria)
  • chlamydia trachomatis (bacteria)
  • rickettsia bellii (bacteria)
  • xanthomonas campestris pv. vesicatoria (strain 85-10) (bacteria)
  • solanum lycopersicum (tomato)
  • homo sapiens (human)
KeywordsHYDROLASE / Enzyme / CE clan / Deubiquitinase / Acetyltransferase / DeSUMOylase

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