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Structure paper

TitleKdgf, the Missing Link in the Microbial Metabolism of Uronate Sugars from Pectin and Alginate.
Journal, issue, pagesProc. Natl. Acad. Sci. USA, Vol. 113, Page 6188-, Year 2016
Publish dateDec 3, 2015 (structure data deposition date)
AuthorsHobbs, J.K. / Lee, S.M. / Robb, M. / Hof, F. / Barr, C. / Abe, K.T. / Hehemann, J. / Mclean, R. / Abbott, D.W. / Boraston, A.B.
External linksProc. Natl. Acad. Sci. USA / PubMed:27185956
MethodsX-ray diffraction
Resolution1.5 - 2 Å
Structure data

PDB-5fpx:
The structure of KdgF from Yersinia enterocolitica.
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-5fpz:
The structure of KdgF from Yersinia enterocolitica with malonate bound in the active site.
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-5fq0:
The structure of KdgF from Halomonas sp.
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-NI:
NICKEL (II) ION

ChemComp-HOH:
WATER

ChemComp-MLA:
MALONIC ACID

ChemComp-FLC:
CITRATE ANION

Source
  • yersinia enterocolitica (bacteria)
  • halomonas sp. (bacteria)
KeywordsHYDROLASE / KDGF / PECTIN / ALGINATE / URONATE SUGAR METABOLISM / CUPIN / LYASE

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