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Structure paper

TitleThe MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer.
Journal, issue, pagesJ Immunol., Vol. 196, Page 2327-2334, Year 2016
Publish dateOct 14, 2015 (structure data deposition date)
AuthorsHafstrand, I. / Doorduijn, E.M. / Duru, A.D. / Buratto, J. / Oliveira, C.C. / Sandalova, T. / van Hall, T. / Achour, A.
External linksJ Immunol. / PubMed:26800871
MethodsX-ray diffraction
Resolution1.98 - 2.25 Å
Structure data

PDB-5e8n:
The structure of the TEIPP associated Trh4 peptide in complex with H-2D(b)
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-5e8o:
The structure of the TEIPP associated altered peptide ligand Trh4-p2ABU in complex with H-2D(b)
Method: X-RAY DIFFRACTION / Resolution: 1.98 Å

PDB-5e8p:
The structure of the TEIPP associated altered peptide ligand Trh4-p5NLE in complex with H-2D(b)
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-SO4:
SULFATE ION

ChemComp-HOH:
WATER

Source
  • mus musculus (house mouse)
KeywordsIMMUNE SYSTEM / Cancer / Neo-epitope / TAP-deficiency / TEIPP / MHC-I / Sulfur-pi interactions / non-classical peptide binding / Non-canonical peptide binding

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