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Structure paper

TitleStructure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.
Journal, issue, pagesNucleic Acids Res., Vol. 43, Page 10713-10721, Year 2015
Publish dateJul 9, 2015 (structure data deposition date)
AuthorsHashimoto, H. / Pais, J.E. / Dai, N. / Correa, I.R. / Zhang, X. / Zheng, Y. / Cheng, X.
External linksNucleic Acids Res. / PubMed:26323320
MethodsX-ray diffraction
Resolution2.693 - 2.702 Å
Structure data

PDB-5cg8:
NgTET1 in complex with 5hmC DNA
Method: X-RAY DIFFRACTION / Resolution: 2.702 Å

PDB-5cg9:
NgTET1 in complex with 5mC DNA in space group P3221
Method: X-RAY DIFFRACTION / Resolution: 2.693 Å

Chemicals

ChemComp-AKG:
2-OXOGLUTARIC ACID

ChemComp-MN:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-SO4:
SULFATE ION

ChemComp-EDO:
1,2-ETHANEDIOL

Source
  • naegleria gruberi (eukaryote)
  • synthetic construct (others)
KeywordsOXIDOREDUCTASE/DNA / dioxygenase / 5-hydroxymethylcytosine / NgTET1 / OXIDOREDUCTASE-DNA complex / 5-methylcytosine

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