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Structure paper

TitleLoss of a Functionally and Structurally Distinct ld-Transpeptidase, LdtMt5, Compromises Cell Wall Integrity in Mycobacterium tuberculosis.
Journal, issue, pagesJ. Biol. Chem., Vol. 290, Page 25670-25685, Year 2015
Publish dateApr 6, 2015 (structure data deposition date)
AuthorsBrammer Basta, L.A. / Ghosh, A. / Pan, Y. / Jakoncic, J. / Lloyd, E.P. / Townsend, C.A. / Lamichhane, G. / Bianchet, M.A.
External linksJ. Biol. Chem. / PubMed:26304120
MethodsX-ray diffraction
Resolution1.98 - 2.799 Å
Structure data

PDB-4z7a:
Structural and biochemical characterization of a non-functionally redundant M. tuberculosis (3,3) L,D-Transpeptidase, LdtMt5.
Method: X-RAY DIFFRACTION / Resolution: 1.98 Å

PDB-4zfq:
Structure of M. tuberculosis (3,3) L,D-Transpeptidase, LdtMt5. (Meropenen-adduct form)
Method: X-RAY DIFFRACTION / Resolution: 2.799 Å

Chemicals

ChemComp-PO4:
PHOSPHATE ION

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-ACE:
ACETYL GROUP

ChemComp-HOH:
WATER

ChemComp-DWZ:
(2S,3R,4S)-4-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-3-methyl-3,4-dihydro-2H-pyrrole-5-carboxylic acid / antibiotic*YM

Source
  • mycobacterium tuberculosis (strain atcc 25177 / h37ra) (bacteria)
  • mycobacterium tuberculosis (strain cdc 1551 / oshkosh) (bacteria)
KeywordsTRANSFERASE / peptidoglycan / cell wall biosynthesis / carbapenems / nitrocefin / enzyme kinetics / enzyme structure / antibiotics / cell wall / peptidoglycan linkage / Mycobaterium tuberculosis / L.D-transpeptidases

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