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Structure paper

TitleTowards a functional identification of catalytically inactive [Fe]-hydrogenase paralogs.
Journal, issue, pagesFebs J., Vol. 282, Page 3412-3423, Year 2015
Publish dateMar 17, 2015 (structure data deposition date)
AuthorsFujishiro, T. / Ataka, K. / Ermler, U. / Shima, S.
External linksFebs J. / PubMed:26094576
MethodsX-ray diffraction
Resolution1.65 - 2.2 Å
Structure data

PDB-4yt2:
Hmd II from Methanocaldococcus jannaschii
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4yt4:
Iron guanylylpyridinol (FeGP) cofactor-reconstituted HmdII from Methanocaldococcus jannaschii
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-4yt5:
HmdII from Methanocaldococcus jannaschii with bound methylene-tetrahydromethanopterin
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4yt8:
SeMet-labelled HmdII from Methanocaldococcus jannaschii
Method: X-RAY DIFFRACTION / Resolution: 1.902 Å

Chemicals

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-PEG:
DI(HYDROXYETHYL)ETHER

ChemComp-HOH:
WATER

ChemComp-FE9:
iron-guanylyl pyridinol cofactor

ChemComp-H4M:
5,10-DIMETHYLENE TETRAHYDROMETHANOPTERIN

Source
  • methanocaldococcus jannaschii (archaea)
KeywordsMETAL BINDING PROTEIN / Rossmann-fold / oxidoreductase / Rossmann-like fold / [Fe]-hydrogenase analog / [Fe]-hydrogenase paralog

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