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Structure paper

TitleStructural and biochemical characterization of novel bacterial alpha-galactosidases belonging to glycoside hydrolase family 31
Journal, issue, pagesBiochem. J., Vol. 469, Page 145-158, Year 2015
Publish dateJan 17, 2015 (structure data deposition date)
AuthorsMiyazaki, T. / Ishizaki, Y. / Ichikawa, M. / Nishikawa, A. / Tonozuka, T.
External linksBiochem. J. / PubMed:25942325
MethodsX-ray diffraction
Resolution1.85 - 2.3 Å
Structure data

PDB-4xpo:
Crystal structure of a novel alpha-galactosidase from Pedobacter saltans
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4xpp:
Crystal structure of Pedobacter saltans GH31 alpha-galactosidase complexed with D-galactose
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4xpq:
Crystal structure of Pedobacter saltans GH31 alpha-galactosidase complexed with L-fucose
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-4xpr:
Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase
Method: X-RAY DIFFRACTION / Resolution: 2.01 Å

PDB-4xps:
Crystal structure of the mutant D365A of Pedobacter saltans GH31 alpha-galactosidase complexed with p-nitrophenyl-alpha-galactopyranoside
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-EDO:
1,2-ETHANEDIOL

ChemComp-HOH:
WATER

ChemComp-GAL:
beta-D-galactopyranose

ChemComp-FUL:
beta-L-fucopyranose

ChemComp-GLA:
alpha-D-galactopyranose

ChemComp-NPO:
P-NITROPHENOL

Source
  • pedobacter saltans (bacteria)
KeywordsHYDROLASE / TIM-barrel / GH31

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