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Structure paper

TitleTriggering HIV polyprotein processing by light using rapid photodegradation of a tight-binding protease inhibitor.
Journal, issue, pagesNat Commun, Vol. 6, Page 6461-6461, Year 2015
Publish dateJul 31, 2014 (structure data deposition date)
AuthorsSchimer, J. / Pavova, M. / Anders, M. / Pachl, P. / Sacha, P. / Cigler, P. / Weber, J. / Majer, P. / Rezacova, P. / Krausslich, H.G. ...Schimer, J. / Pavova, M. / Anders, M. / Pachl, P. / Sacha, P. / Cigler, P. / Weber, J. / Majer, P. / Rezacova, P. / Krausslich, H.G. / Muller, B. / Konvalinka, J.
External linksNat Commun / PubMed:25751579
MethodsX-ray diffraction
Resolution1.38 - 1.7 Å
Structure data

PDB-4u7q:
Structure of wild-type HIV protease in complex with photosensitive inhibitor PDI-6
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-4u7v:
Structure of wild-type HIV protease in complex with degraded photosensitive inhibitor
Method: X-RAY DIFFRACTION / Resolution: 1.38 Å

Chemicals

ChemComp-3EM:
N~2~-({[7-(diethylamino)-2-oxo-2H-chromen-4-yl]methoxy}carbonyl)-N-[(2S,4S,5S)-4-hydroxy-1,6-diphenyl-5-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}hexan-2-yl]-L-valinamide

ChemComp-HOH:
WATER

ChemComp-BME:
BETA-MERCAPTOETHANOL

ChemComp-3EN:
N-[(2S,4S,5S)-4-hydroxy-1,6-diphenyl-5-{[(1,3-thiazol-5-ylmethoxy)carbonyl]amino}hexan-2-yl]-L-valinamide

Source
  • human immunodeficiency virus 1
KeywordsHYDROLASE / HIV-1 / viral protease / aspartic protease / inhibition

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