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Structure paper

TitleStructural and Kinetic Analysis of Nucleoside Triphosphate Incorporation Opposite an Abasic Site by Human Translesion DNA Polymerase eta.
Journal, issue, pagesJ. Biol. Chem., Vol. 290, Page 8028-8038, Year 2015
Publish dateOct 24, 2014 (structure data deposition date)
AuthorsPatra, A. / Zhang, Q. / Lei, L. / Su, Y. / Egli, M. / Guengerich, F.P.
External linksJ. Biol. Chem. / PubMed:25666608
MethodsX-ray diffraction
Resolution1.808 - 2.82 Å
Structure data

PDB-4rnm:
Crystal structure of human polymerase eta inserting dAMPnPP opposite DNA template containing an abasic site
Method: X-RAY DIFFRACTION / Resolution: 2.144 Å

PDB-4rnn:
Crystal structure of human polymerase eta inserting dGMPnPP opposite DNA template containing an abasic site
Method: X-RAY DIFFRACTION / Resolution: 1.808 Å

PDB-4rno:
Crystal structure of human polymerase eta extending an abasic site-dA pair by inserting dCTP opposite template G
Method: X-RAY DIFFRACTION / Resolution: 2.82 Å

Chemicals

ChemComp-DZ4:
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine

ChemComp-MG:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-XG4:
2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine

ChemComp-DCP:
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE

ChemComp-CA:
Unknown entry

Source
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsTRANSFERASE/DNA / Protein / DNA / DNA Damage DNA-Directed DNA Polymerase / Adenosine Triphosphate / Y-family polymerase / trans-lesion synthesis (TLS) / DNA Binding / Abasic Site lesion bypass / TRANSFERASE-DNA complex

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