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Structure paper

TitleStructures of Plasmodium vivax serine hydroxymethyltransferase: implications for ligand-binding specificity and functional control.
Journal, issue, pagesActa Crystallogr. ,Sect. D, Vol. 70, Page 3177-3186, Year 2014
Publish dateFeb 13, 2014 (structure data deposition date)
AuthorsChitnumsub, P. / Jaruwat, A. / Riangrungroj, P. / Ittarat, W. / Noytanom, K. / Oonanant, W. / Vanichthanankul, J. / Chuankhayan, P. / Maenpuen, S. / Chen, C.J. ...Chitnumsub, P. / Jaruwat, A. / Riangrungroj, P. / Ittarat, W. / Noytanom, K. / Oonanant, W. / Vanichthanankul, J. / Chuankhayan, P. / Maenpuen, S. / Chen, C.J. / Chaiyen, P. / Yuthavong, Y. / Leartsakulpanich, U.
External linksActa Crystallogr. ,Sect. D / PubMed:25478836
MethodsX-ray diffraction
Resolution2.3 - 2.5 Å
Structure data

PDB-4oyt:
Crystal structure of ternary complex of Plasmodium vivax SHMT with D-serine and folinic acid
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4pff:
Crystal structure of Plasmodium vivax SHMT with PLP Schiff base
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

PDB-4pfn:
Crystal structure of Plasmodium vivax SHMT with L-serine Schiff base
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

Chemicals

ChemComp-1W9:
(2R)-2-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]-3-oxidanyl-propanoic acid

ChemComp-FON:
N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid

ChemComp-GOL:
GLYCEROL

ChemComp-TRS:
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL / pH buffer*YM

ChemComp-ETF:
TRIFLUOROETHANOL

ChemComp-HOH:
WATER

ChemComp-PLP:
PYRIDOXAL-5'-PHOSPHATE

ChemComp-SER:
SERINE

ChemComp-CL:
Unknown entry

Source
  • plasmodium vivax (malaria parasite P. vivax)
KeywordsTRANSFERASE / alpha and beta protein / methyltransferase activity / PLP-dependent protein

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