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Structure paper

TitleMispairs with Watson-Crick base-pair geometry observed in ternary complexes of an RB69 DNA polymerase variant.
Journal, issue, pagesProtein Sci., Vol. 23, Page 508-513, Year 2014
Publish dateAug 6, 2013 (structure data deposition date)
AuthorsXia, S. / Konigsberg, W.H.
External linksProtein Sci. / PubMed:24458997
MethodsX-ray diffraction
Resolution1.84 - 2.2 Å
Structure data

PDB-4m3r:
RB69 DNA polymerase ternary complex with dT/dG at position n-1 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 2.07 Å

PDB-4m3t:
RB69 DNA polymerase ternary complex with dT/dG at position n-2 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4m3u:
RB69 DNA polymerase ternary complex with dT/dG at position n-3 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 2.07 Å

PDB-4m3w:
RB69 DNA polymerase ternary complex with dT/dG at position n-4 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4m3x:
RB69 DNA polymerase ternary complex with dT/dG at position n-5 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 2.2 Å

PDB-4m3y:
RB69 DNA polymerase ternary complex with dG/dT at position n-1 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 1.86 Å

PDB-4m3z:
RB69 DNA polymerase ternary complex with dG/dT at position n-2 of primer/tempLate duplex
Method: X-RAY DIFFRACTION / Resolution: 1.84 Å

PDB-4m41:
RB69 DNA polymerase ternary complex with dG/dT at position n-3 of primer/tempLate duplex
Method: X-RAY DIFFRACTION / Resolution: 2.15 Å

PDB-4m42:
RB69 DNA polymerase ternary complex with dG/dT at position n-4 of primer/tempLate duplex
Method: X-RAY DIFFRACTION / Resolution: 2.04 Å

PDB-4m45:
RB69 DNA polymerase ternary complex with dG/dT at position n-5 of primer/template duplex
Method: X-RAY DIFFRACTION / Resolution: 1.89 Å

Chemicals

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-CA:
Unknown entry

ChemComp-HOH:
WATER

Source
  • enterobacteria phage rb69 (virus)
KeywordsHYDROLASE/DNA / RB69 pol / quadruple / dT/dG / n-1 / RB69 / HYDROLASE-DNA complex / n-2 / n-3 / n-4 / n-5 / dG/dT

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