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Structure paper

TitleDissecting the contribution of thrombin exosite I in the recognition of thrombin binding aptamer.
Journal, issue, pagesFebs J., Vol. 280, Page 6581-6588, Year 2013
Publish dateJul 31, 2013 (structure data deposition date)
AuthorsPica, A. / Russo Krauss, I. / Merlino, A. / Nagatoishi, S. / Sugimoto, N. / Sica, F.
External linksFebs J. / PubMed:24128303
MethodsX-ray diffraction
Resolution1.65 - 2.56 Å
Structure data

PDB-4lz1:
X-ray structure of the complex between human thrombin and the TBA deletion mutant lacking thymine 12 nucleobase
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4lz4:
X-ray structure of the complex between human thrombin and the TBA deletion mutant lacking thymine 3 nucleobase
Method: X-RAY DIFFRACTION / Resolution: 2.56 Å

Chemicals

ChemComp-0G6:
D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide

ChemComp-K:
Unknown entry

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

Source
  • homo sapiens (human)
KeywordsHYDROLASE/HYDROLASE INHIBITOR/DNA / PROTEIN-DNA COMPLEX / BLOOD COAGULATION / APTAMER / INHIBITOR-DNA COMPLEX / DNA APTAMER / G-QUADRUPLEX / Serine protease / Hydrolase / abasic furan / DNA thymine nucleobase deletion / blood / HYDROLASE-DNA complex / HYDROLASE-HYDROLASE INHIBITOR-DNA complex / TBA DELETION MUTANT

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