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Structure paper

TitleCrystal structures of B-DNA dodecamer containing the epigenetic modifications 5-hydroxymethylcytosine or 5-methylcytosine.
Journal, issue, pagesNucleic Acids Res., Vol. 41, Page 9891-9900, Year 2013
Publish dateAug 10, 2012 (structure data deposition date)
AuthorsRenciuk, D. / Blacque, O. / Vorlickova, M. / Spingler, B.
External linksNucleic Acids Res. / PubMed:23963698
MethodsX-ray diffraction
Resolution1.412 - 1.99 Å
Structure data

PDB-4gju:
5-Methylcytosine modified DNA oligomer
Method: X-RAY DIFFRACTION / Resolution: 1.412 Å

PDB-4glc:
DNA dodecamer containing 5-hydroxymethyl-cytosine
Method: X-RAY DIFFRACTION / Resolution: 1.831 Å

PDB-4glg:
DNA dodecamer containing 5-methyl cytosine
Method: X-RAY DIFFRACTION / Resolution: 1.72 Å

PDB-4glh:
DNA dodecamer containing 5-hydroxymethyl cytosine
Method: X-RAY DIFFRACTION / Resolution: 1.662 Å

PDB-4hli:
DNA dodecamer containing 5-hydroxymethyl-cytosine
Method: X-RAY DIFFRACTION / Resolution: 1.99 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-K:
Unknown entry

Source
  • synthetic dna (others)
  • synthetic construct (others)
  • homo sapiens (human)
KeywordsDNA / double-stranded B-DNA / 5-Methylcytosine / epigenetics / B-DNA dodecamer / 5-hydroxymethyl cytosine / 5-methyl cytosine

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