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Structure paper

TitleStructural and biochemical analysis of the phosphate donor specificity of the polynucleotide kinase component of the bacterial pnkphen1 RNA repair system.
Journal, issue, pagesBiochemistry, Vol. 52, Page 4734-4743, Year 2013
Publish dateMar 22, 2013 (structure data deposition date)
AuthorsDas, U. / Wang, L.K. / Smith, P. / Shuman, S.
External linksBiochemistry / PubMed:23721485
MethodsX-ray diffraction
Resolution2.01 - 2.49 Å
Structure data

PDB-4jst:
Structure of Clostridium thermocellum polynucleotide kinase bound to UTP
Method: X-RAY DIFFRACTION / Resolution: 2.03 Å

PDB-4jsy:
Structure of Clostridium thermocellum polynucleotide kinase bound to GTP
Method: X-RAY DIFFRACTION / Resolution: 2.14 Å

PDB-4jt2:
Structure of Clostridium thermocellum polynucleotide kinase bound to CTP
Method: X-RAY DIFFRACTION / Resolution: 2.49 Å

PDB-4jt4:
Structure of Clostridium thermocellum polynucleotide kinase bound to dATP
Method: X-RAY DIFFRACTION / Resolution: 2.01 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-UTP:
URIDINE 5'-TRIPHOSPHATE / UTP*YM

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-GTP:
GUANOSINE-5'-TRIPHOSPHATE / GTP, energy-carrying molecule*YM

ChemComp-CTP:
CYTIDINE-5'-TRIPHOSPHATE

ChemComp-DTP:
2'-DEOXYADENOSINE 5'-TRIPHOSPHATE

Source
  • clostridium thermocellum (bacteria)
KeywordsTRANSFERASE / RNA repair / P-loop phosphotransferase / polynucleotide kinase

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