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Structure paper

TitleA conformational switch in PRP8 mediates metal ion coordination that promotes pre-mRNA exon ligation.
Journal, issue, pagesNat. Struct. Mol. Biol., Vol. 20, Page 728-734, Year 2013
Publish dateMar 9, 2013 (structure data deposition date)
AuthorsSchellenberg, M.J. / Wu, T. / Ritchie, D.B. / Fica, S. / Staley, J.P. / Atta, K.A. / Lapointe, P. / Macmillan, A.M.
External linksNat. Struct. Mol. Biol. / PubMed:23686287
MethodsX-ray diffraction
Resolution1.15 - 1.95 Å
Structure data

PDB-4jk7:
Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.4 Å

PDB-4jk8:
Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.15 Å

PDB-4jk9:
Open and closed forms of wild-type human PRP8 RNase H-like domain with bound Co ion
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4jka:
Open and closed forms of R1865A human PRP8 RNase H-like domain with bound Co ion
Method: X-RAY DIFFRACTION / Resolution: 1.32 Å

PDB-4jkb:
Open and closed forms of V1788D human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.3 Å

PDB-4jkc:
Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-4jkd:
Open and closed forms of I1790Y human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.55 Å

PDB-4jke:
Open and closed forms of T1789P human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.65 Å

PDB-4jkf:
Open and closed forms of T1791P+R1865A human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.95 Å

PDB-4jkg:
Open and closed forms of mixed T1789P+R1865A and R1865A human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-4jkh:
Open and closed forms of D1781E human PRP8 RNase H-like domain with bound Mg ion
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-CL:
Unknown entry

ChemComp-MG:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-CO:
Unknown entry

Source
  • homo sapiens (human)
KeywordsRNA BINDING PROTEIN / metalloprotein / conformational change

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