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Structure paper

TitleO-Glcnac Transferase Invokes Nucleotide Sugar Pyrophosphate Participation in Catalysis
Journal, issue, pagesNat. Chem. Biol., Vol. 8, Page 969-, Year 2012
Publish dateJun 18, 2012 (structure data deposition date)
AuthorsSchimpl, M. / Zheng, X. / Borodkin, V.S. / Blair, D.E. / Ferenbach, A.T. / Schuettelkopf, A.W. / Navratilova, I. / Aristotelous, T. / Albarbarawi, O. / Robinson, D.A. ...Schimpl, M. / Zheng, X. / Borodkin, V.S. / Blair, D.E. / Ferenbach, A.T. / Schuettelkopf, A.W. / Navratilova, I. / Aristotelous, T. / Albarbarawi, O. / Robinson, D.A. / Macnaughtan, M.A. / Van Aalten, D.M.F.
External linksNat. Chem. Biol. / PubMed:23103942
MethodsX-ray diffraction
Resolution3.15 - 3.3 Å
Structure data

PDB-4ay5:
Human O-GlcNAc transferase (OGT) in complex with UDP and glycopeptide
Method: X-RAY DIFFRACTION / Resolution: 3.15 Å

PDB-4ay6:
Human O-GlcNAc transferase (OGT) in complex with UDP-5SGlcNAc and substrate peptide
Method: X-RAY DIFFRACTION / Resolution: 3.3 Å

Chemicals

ChemComp-UDP:
URIDINE-5'-DIPHOSPHATE / UDP*YM

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-SO4:
SULFATE ION

ChemComp-12V:
(2S,3R,4R,5S,6R)-3-(acetylamino)-4,5-dihydroxy-6-(hydroxymethyl)tetrahydro-2H-thiopyran-2-yl [(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methyl dihydrogen diphosphate

Source
  • homo sapiens (human)
  • synthetic construct (others)
KeywordsTRANSFERASE/PEPTIDE / TRANSFERASE-PEPTIDE COMPLEX / TRANSFERASE / GLYCOSYL TRANSFERASE / TRIMERIC PRODUCT COMPLEX / O-GLCNAC

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