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Structure paper

TitleStructural Basis of Rotavirus Strain Preference toward N-Acetyl- or N-Glycolylneuraminic Acid-Containing Receptors.
Journal, issue, pagesJ. Virol., Vol. 86, Page 13456-13466, Year 2012
Publish dateAug 4, 2011 (structure data deposition date)
AuthorsYu, X. / Dang, V.T. / Fleming, F.E. / von Itzstein, M. / Coulson, B.S. / Blanchard, H.
External linksJ. Virol. / PubMed:23035213
MethodsX-ray diffraction
Resolution1.85 - 2 Å
Structure data

PDB-3tay:
Crystal structure of porcine rotavirus CRW-8 VP8* in complex with N-glycolylneuraminic acid
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-3tb0:
Crystal structure of Rhesus Rotavirus VP8* in complex with N-Glycolylneuraminic acid
Method: X-RAY DIFFRACTION / Resolution: 2 Å

Chemicals

ChemComp-MN0:
methyl 3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-alpha-D-galacto-non-2-ulopyranosidonic acid

ChemComp-SO4:
SULFATE ION

ChemComp-MPD:
(4S)-2-METHYL-2,4-PENTANEDIOL / precipitant*YM

ChemComp-EPE:
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID / pH buffer*YM

ChemComp-BEN:
BENZAMIDINE

ChemComp-NA:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-GOL:
GLYCEROL

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM

Source
  • porcine rotavirus
  • rhesus rotavirus
KeywordsSUGAR BINDING PROTEIN / VIRAL PROTEIN / BETA SANDWICH / LECTIN / Neu5Gc

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