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Structure paper

TitleStructures of Pup ligase PafA and depupylase Dop from the prokaryotic ubiquitin-like modification pathway.
Journal, issue, pagesNat Commun, Vol. 3, Page 1014-1014, Year 2012
Publish dateJul 4, 2012 (structure data deposition date)
AuthorsOzcelik, D. / Barandun, J. / Schmitz, N. / Sutter, M. / Guth, E. / Damberger, F.F. / Allain, F.H. / Ban, N. / Weber-Ban, E.
External linksNat Commun / PubMed:22910360
MethodsX-ray diffraction
Resolution2.159 - 2.85 Å
Structure data

PDB-4b0r:
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-4b0s:
Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ATP
Method: X-RAY DIFFRACTION / Resolution: 2.85 Å

PDB-4b0t:
Structure of the Pup Ligase PafA of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP
Method: X-RAY DIFFRACTION / Resolution: 2.159 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-ATP:
ADENOSINE-5'-TRIPHOSPHATE / ATP, energy-carrying molecule*YM

ChemComp-MG:
Unknown entry

ChemComp-ADP:
ADENOSINE-5'-DIPHOSPHATE / ADP, energy-carrying molecule*YM

Source
  • acidothermus cellulolyticus (bacteria)
  • corynebacterium glutamicum (bacteria)
KeywordsHYDROLASE / PUPYLATION / DEPUPYLATION / PROTEASOME / PROKARYOTIC UBIQUITIN-LIKE PROTEIN / LIGASE

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