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Structure paper

TitleDuplex interrogation by a direct DNA repair protein in search of base damage
Journal, issue, pagesNat. Struct. Mol. Biol., Vol. 19, Page 671-676, Year 2012
Publish dateMay 11, 2011 (structure data deposition date)
AuthorsYi, C. / Chen, B. / Qi, B. / Zhang, W. / Jia, G. / Zhang, L. / Li, C.J. / Dinner, A.R. / Yang, C.G. / He, C.
External linksNat. Struct. Mol. Biol. / PubMed:22659876
MethodsX-ray diffraction
Resolution1.6 - 3.06 Å
Structure data

PDB-3rzg:
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Method: X-RAY DIFFRACTION / Resolution: 1.62 Å

PDB-3rzh:
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-3rzj:
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Method: X-RAY DIFFRACTION / Resolution: 2.5 Å

PDB-3rzk:
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Method: X-RAY DIFFRACTION / Resolution: 2.78 Å

PDB-3rzl:
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Method: X-RAY DIFFRACTION / Resolution: 2.6 Å

PDB-3rzm:
Duplex Interrogation by a Direct DNA Repair Protein in the Search of Damage
Method: X-RAY DIFFRACTION / Resolution: 3.06 Å

PDB-3s57:
ABH2 cross-linked with undamaged dsDNA-1 containing cofactors
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-3s5a:
ABH2 cross-linked to undamaged dsDNA-2 with cofactors
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

Chemicals

ChemComp-GOL:
GLYCEROL

ChemComp-XL3:
propane-1-thiol

ChemComp-HOH:
WATER

ChemComp-MN:
Unknown entry

ChemComp-AKG:
2-OXOGLUTARIC ACID

Source
  • homo sapiens (human)
KeywordsOXIDOREDUCTASE/DNA / PROTEIN-DNA COMPLEX / jelly-roll / demethylase / Nucleus / OXIDOREDUCTASE-DNA complex / Jelly-roll fold / dioxygenase / dsDNA binding / plasma / DOUBLE HELIX / DNA Binding / cross-linking

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