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Structure paper

TitleCrystal structures of Staphylococcus epidermidis mevalonate diphosphate decarboxylase bound to inhibitory analogs reveal new insight into substrate binding and catalysis.
Journal, issue, pagesJ. Biol. Chem., Vol. 286, Page 23900-23910, Year 2011
Publish dateFeb 22, 2011 (structure data deposition date)
AuthorsBarta, M.L. / Skaff, D.A. / McWhorter, W.J. / Herdendorf, T.J. / Miziorko, H.M. / Geisbrecht, B.V.
External linksJ. Biol. Chem. / PubMed:21561869
MethodsX-ray diffraction
Resolution1.848 - 2.199 Å
Structure data

PDB-3qt5:
Crystal structure of Staphylococcus epidermidis mevalonate diphosphate decarboxylase
Method: X-RAY DIFFRACTION / Resolution: 1.848 Å

PDB-3qt6:
Crystal structure of Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor DPGP
Method: X-RAY DIFFRACTION / Resolution: 2.047 Å

PDB-3qt7:
Crystal structure of Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor 6-FMVAPP
Method: X-RAY DIFFRACTION / Resolution: 2.199 Å

PDB-3qt8:
Crystal structure of mutant S192A Staphylococcus epidermidis mevalonate diphosphate decarboxylase complexed with inhibitor 6-FMVAPP
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

Chemicals

ChemComp-HOH:
WATER

ChemComp-2P0:
1-({[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}acetyl)-L-proline

ChemComp-FM0:
(3R)-3-(fluoromethyl)-3-hydroxy-5-{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}pentanoic acid

ChemComp-GOL:
GLYCEROL

Source
  • staphylococcus epidermidis (bacteria)
KeywordsLYASE / GHMP kinase family / LYASE/LYASE INHIBITOR / LYASE-LYASE INHIBITOR complex

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