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Structure paper

TitleGalactose-modified iNKT cell agonists stabilized by an induced fit of CD1d prevent tumour metastasis.
Journal, issue, pagesEmbo J., Vol. 30, Page 2294-2305, Year 2011
Publish dateFeb 24, 2011 (structure data deposition date)
AuthorsAspeslagh, S. / Li, Y. / Yu, E.D. / Pauwels, N. / Trappeniers, M. / Girardi, E. / Decruy, T. / Van Beneden, K. / Venken, K. / Drennan, M. ...Aspeslagh, S. / Li, Y. / Yu, E.D. / Pauwels, N. / Trappeniers, M. / Girardi, E. / Decruy, T. / Van Beneden, K. / Venken, K. / Drennan, M. / Leybaert, L. / Wang, J. / Franck, R.W. / Van Calenbergh, S. / Zajonc, D.M. / Elewaut, D.
External linksEmbo J. / PubMed:21552205
MethodsX-ray diffraction
Resolution2.25 - 2.91 Å
Structure data

PDB-3qux:
Structure of the mouse CD1d-alpha-C-GalCer-iNKT TCR complex
Method: X-RAY DIFFRACTION / Resolution: 2.91 Å

PDB-3quy:
Structure of the mouse CD1d-BnNH-GSL-1'-iNKT TCR complex
Method: X-RAY DIFFRACTION / Resolution: 2.25 Å

PDB-3quz:
Structure of the mouse CD1d-NU-alpha-GalCer-iNKT TCR complex
Method: X-RAY DIFFRACTION / Resolution: 2.3 Å

Chemicals

ChemComp-NAG:
2-acetamido-2-deoxy-beta-D-glucopyranose

ChemComp-QUX:
N-[(3S,4S,5R)-4,5-dihydroxy-1-[(2R,3R,4R,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]nonadecan-3-yl]hexacosanamide

ChemComp-QUY:
(2S,3R,4S,5R,6S)-6-[(2S,3S,4R)-2-(hexacosanoylamino)-3,4-dihydroxy-octadecoxy]-3,4,5-trihydroxy-N-(phenylmethyl)oxane-2-carboxamide

ChemComp-GOL:
GLYCEROL

ChemComp-HOH:
WATER

ChemComp-QUV:
N-[(2S,3S,4R)-1-({6-deoxy-6-[(naphthalen-1-ylcarbamoyl)amino]-alpha-D-galactopyranosyl}oxy)-3,4-dihydroxyoctadecan-2-yl]hexacosanamide

Source
  • mus musculus (house mouse)
KeywordsIMMUNE SYSTEM / antigen presentation / glycolipid / NKT cells

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