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Structure paper

TitleLearning from Directed Evolution: Thermus aquaticus DNA Polymerase Mutants with Translesion Synthesis Activity.
Journal, issue, pagesChembiochem, Vol. 12, Page 1574-1580, Year 2011
Publish dateNov 22, 2010 (structure data deposition date)
AuthorsObeid, S. / Schnur, A. / Gloeckner, C. / Blatter, N. / Welte, W. / Diederichs, K. / Marx, A.
External linksChembiochem / PubMed:21480455
MethodsX-ray diffraction
Resolution1.74 - 2.39 Å
Structure data

PDB-3po4:
Structure of a mutant of the large fragment of DNA polymerase I from Thermus aquaticus in complex with a blunt-ended DNA and ddATP
Method: X-RAY DIFFRACTION / Resolution: 1.8 Å

PDB-3po5:
Structure of a mutant of the large fragment of DNA polymerase I from Thermus Auqaticus in complex with an abasic site and ddATP
Method: X-RAY DIFFRACTION / Resolution: 2.39 Å

PDB-3py8:
Crystal structure of a mutant of the large fragment of DNA polymerase I from thermus aquaticus in a closed ternary complex with DNA and ddCTP
Method: X-RAY DIFFRACTION / Resolution: 1.74 Å

Chemicals

ChemComp-MG:
Unknown entry

ChemComp-NA:
Unknown entry

ChemComp-GOL:
GLYCEROL

ChemComp-DDS:
2',3'-dideoxyadenosine triphosphate

ChemComp-HOH:
WATER

ChemComp-PGE:
TRIETHYLENE GLYCOL

ChemComp-DCT:
2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE

ChemComp-MN:
Unknown entry

Source
  • thermus aquaticus (bacteria)
KeywordsTRANSFERASE/DNA / DNA polymerase / blunt-ended DNA / processing an A-overhang / DNA primer/template duplex / ddATP / TRANSFERASE-DNA complex / lesion bypass / apsite / abasic site / Modified Klenow fragment / Transferase / polymerase / nucleoside binding / nucleic acid binding / DNA binding / catalytic activity / DNA-directed DNA polymerase activity / 5'-3' exonuclease activity / nucleotides / modified nucleotide / artificial nucleotide / nucleotide probes

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