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Structure paper

TitleThe structure of a high fidelity DNA polymerase bound to a mismatched nucleotide reveals an "ajar" intermediate conformation in the nucleotide selection mechanism.
Journal, issue, pagesJ. Biol. Chem., Vol. 286, Page 19758-19767, Year 2011
Publish dateJun 3, 2009 (structure data deposition date)
AuthorsWu, E.Y. / Beese, L.S.
External linksJ. Biol. Chem. / PubMed:21454515
MethodsX-ray diffraction
Resolution1.7 - 1.81 Å
Structure data

PDB-3hp6:
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus F710Y mutant bound to G:T mismatch
Method: X-RAY DIFFRACTION / Resolution: 1.81 Å

PDB-3hpo:
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus Y714S mutant bound to G:T mismatch
Method: X-RAY DIFFRACTION / Resolution: 1.75 Å

PDB-3ht3:
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus V713P mutant bound to G:dCTP
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

Chemicals

ChemComp-SO4:
SULFATE ION

ChemComp-MG:
Unknown entry

ChemComp-D3T:
2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE

ChemComp-HOH:
WATER

ChemComp-TTP:
THYMIDINE-5'-TRIPHOSPHATE

ChemComp-DCP:
2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE

Source
  • geobacillus stearothermophilus (bacteria)
KeywordsTRANSFERASE/DNA / protein-DNA complex / DNA polymerase I / DNA replication / DNA-binding / DNA-directed DNA polymerase / Hydrolase / Nuclease / Nucleotidyltransferase / Transferase / TRANSFERASE-DNA COMPLEX

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