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Structure paper

TitleNovel ligands for a purine riboswitch discovered by RNA-ligand docking.
Journal, issue, pagesChem. Biol., Vol. 18, Page 324-335, Year 2011
Publish dateAug 6, 2010 (structure data deposition date)
AuthorsDaldrop, P. / Reyes, F.E. / Robinson, D.A. / Hammond, C.M. / Lilley, D.M. / Batey, R.T. / Brenk, R.
External linksChem. Biol. / PubMed:21439477
MethodsX-ray diffraction
Resolution1.5 - 1.7 Å
Structure data

PDB-2xnw:
XPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO- TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENING
Method: X-RAY DIFFRACTION / Resolution: 1.5 Å

PDB-2xnz:
xpt-pbuX C74U Riboswitch from B. subtilis bound to acetoguanamine identified by virtual screening
Method: X-RAY DIFFRACTION / Resolution: 1.59 Å

PDB-2xo0:
xpt-pbuX C74U Riboswitch from B. subtilis bound to 24-diamino-1,3,5- triazine identified by virtual screening
Method: X-RAY DIFFRACTION / Resolution: 1.7 Å

PDB-2xo1:
xpt-pbuX C74U Riboswitch from B. subtilis bound to N6-methyladenine
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

Chemicals

ChemComp-NCO:
COBALT HEXAMMINE(III)

ChemComp-ACT:
ACETATE ION

ChemComp-ZZR:
3,6-diamino-1,5-dihydro[1,2,4]triazolo[4,3-b][1,2,4]triazol-4-ium

ChemComp-K:
Unknown entry

ChemComp-HOH:
WATER

ChemComp-3AW:
6-METHYL-1,3,5-TRIAZINE-2,4-DIAMINE

ChemComp-ZZS:
1,3,5-TRIAZINE-2,4-DIAMINE

ChemComp-N6M:
N-METHYL-9H-PURIN-6-AMINE

Source
  • bacillus subtilis (bacteria)
KeywordsRNA / APTAMER / RNA-LIGAND COMPLEX / MRNA

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